CDS
| Accession Number | TCMCG027C43595 |
| gbkey | CDS |
| Protein Id | XP_018856657.1 |
| Location | join(9246229..9246744,9256155..9258049,9258832..9258982,9259865..9260698) |
| Gene | LOC109018917 |
| GeneID | 109018917 |
| Organism | Juglans regia |
Protein
| Length | 1131aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA350852 |
| db_source | XM_019001112.2 |
| Definition | RNA-dependent RNA polymerase 1 [Juglans regia] |
EGGNOG-MAPPER Annotation
| COG_category | A |
| Description | Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs) |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko01000 [VIEW IN KEGG] ko03036 [VIEW IN KEGG] |
| KEGG_ko |
ko:K11699
[VIEW IN KEGG] |
| EC |
2.7.7.48
[VIEW IN KEGG]
[VIEW IN INGREDIENT] |
| KEGG_Pathway | - |
| GOs | - |
Sequence
| CDS: ATGGGGAAGACAATTCACTTGTCTGGATTCCCTTCTAGTGTGACTGCACAAGAAGTTCAGGAATTTCTGGAGCGACATACAGGTGAAGGTACTGTTTATGCTATTAAGATTAGACCAAACAGAAGTGGGGGTCAACGAGCAAATGCAACTGTTCAATTCACCAGCAACAGACATGCTGAGTCTATTATCTCCTTGGCTAATGTACGCTTATGGTATGGGCGCTCTTATTTGAAGGCATGGGAAAGGGAGCGTGATATAGTACCAAAGCCAAGAACCTTTCTGCATAGCTTGGAAAACATAATACTGCATTTTGGCTGTCAGATCTCAAATGAAAAGTTTTCAATCCTATGGCGAGCAGTAAATGTTTGTGTGAATTTTGGGACTGGGTTGCGGAAATTTCAATTTGTTCTATCGCTTAATTCTGTGGAGTACAAGCTTGAATTTTCCTATGAGAACATATGGCAGATTGAGTTGCATCGCCCACGTGGTCAAACTGCAAAGTATCTTCTGATCCAGTTATTTGGTGCTCCACGGATTTATGAGAAAGATTCGCAGCCTTCAGACAATTTATATGAAAATCCCCTTTTCAATTTTTTCAAGGATATCCCTGATGACCAATGGGTCAGGGGAGTGGATTTTACCCCATCATGTTGCATTGGGCAATCTTCTTCATTGTGTTTGGAGCTTCCTCATGGCCACCAGCTTCCAGATTTTCGGGAGAACTTTGCTTATTATAAAGAAAGTGAAGGAAGATATATTCTGGAAAGTGGTTCTACTTTCTCTTGTAATCTGGATCTAGTTCCTATTGTTGGCCCTTCTCCAGGTGTTGATTTACCGTATGAAATCTTGTTTAAAATTAACTCCTTGGTTCAGAATGGCTGTCTTGCTGGACCAACACTTGATGTTAGGTTTTATCGCTTGGTTAATCCACGTACTATAAACATTGACTGTATAGAACATGCACTGGACAAACTCTCTCATATACAGGAATGTTGCTATGACCCATTGATGTGGCTCAATGAGCAGTACAGAAAGTACCTCAAAGCAAGGCATCCTCCAAAGTCGCCTGCTATATCAGACTCTGGGTTGTGTTATGTACGCAGGGTTCAGATAACACCTTCGAAAGTGTACTTCTGTGGTCCAGAAATTAATGTATCAAATCGTGTGCTGCGCTATTTTCGTGATGATATAGATAATTTTCTCCGTGTCTCATTTGTTGATGAGGATTTGGATAAAATGTTTTCAACAGATTTATCTTCTCGGGTGTCTTCTGCAAATGAAGATAGGAAAACTGGAATCTACAAAAGGATTCTTTCTGTTCTCAGAAATGGCATAGTTTTTGCTGGTAAGAAGTTTGAGACTCTTGCATTCTCATCAAGTCAGTTACGGGATAATTCTATATGGATGTTTGCTTCAAGACATGGGCTTACTGCTGCTGATATAAGAGCCTGGATGGGAAATTTTTGTCATATTAGAAACGTGGCAAAATATGCTGCCAGACTGGGTCAATCCTTTGGCTCATCCACAGAAACGCTTACGGTTCATGCACGTGAAATTGAAATTATACCTGATGTAGAGTTAAAATGGGGTGGAGTCAATTATGTTTTCTCTGATGGAATCGGGAAAATATCCGCTGAGTTTGCGAAGAAAGTGGCTTTGAAATGTGGCTTTAAAGGATCCCATCCATCAGCCTTTCAGATTCGATATGGTGGGTATAAAGGTGTTGTTGCTGTTGATCCAACCTCACCAATGAAATTATCATTGAGGAAGAGCATGTCCAAGTATAAAGCAGATAACCACAAGAAACTAGATGTCTTGGCATTTAGCAAGTTTCAGCCTTGTTTTCTGAATCGCCAGTTGATCACTCTGTTGTCTACCCTTGGTGTGAAGGATAACGTTTTTGAGAATAAACAAAGACAAGCTATAGAACAACTGGATGCTATACTAAGAGATCCATTGAAGGCACAAGAGGCTCTTGATTTGATGTCCCCAGGAGAGAATACTAACATTCTAAAGGAAATGCTCATGTGTGGTTACAAGCCTGATGCTGAACCATTTCTTGCTATGATGCTGCAGACATTCCGGGCATCGAAATTGTTGGAGTTGCGAACCAAAACAAGGATCTTTATTCCAGATGGAAGAGCAATGATGGGATGTCTAGATGAAACTGGAACCTTAGAATATGGTCAGGTATTTGTACAATTTTCTAGCACTAGACACAAGCAGTCGTTCAATGATTCCATCATGTTCGGTGACCATGGATCCGATCAGCATTTTTTAGTTACAGGGAAGGTGGTGGTTGCCAAAAACCCATGCTTGCATCCAGGCGATGTGCGTGTTTTAAGGGCTGTAAATGTGCCGGCATTGCACCATTTGGTGGATTGTGTTGTTTTTCCTCAGAAAGGATTGAGACCACATCCCAATGAGTGTTCTGGAAGTGATTTGGATGGAGATATCTACTTTGTCTGTTGGGATCCTGAACTTATCCCACCTCGGCAAAACGAACCAATGGATTATTCCCCAGCAAAAAGTATGCAGTTGGATCACGATGTTACAATTGAGGAAGTCGAGGAGTATTTCGTCAATTACATAGTCAATGACAGCTTAGGTATTATTGCCAATGCCCACACGGCTTTCGCGGATAGAGAGCCCCAAAAAGCAATGAGTGGCCCATGCATAGAGTTGGCAAAACTATTTTCAATCGCTGTTGATTTTCCAAAGACTGGCATACCAGCTGAAATTCCACGTGAGCTTCGGGTCAAAGATTATCCAGATTTCATGGACAAGCCAGACAAACCCACATATGAATCACACAATGTGATTGGAAAGCTTTACCGGGAGGTGAAAGATATTGCTCCCAATAATGCTTCTTTTAGGTCCTTCACTGTAGAAATGGCAAGGCGTTCATATGACCCTGACATGGAAATTGATGGATTTGAAGATTTTGTCGATGATGCTTTCTTCTACAAAGACAATTATGATTACAAGTTGGGGAACTTGATGGACTATTATGGCATCAAAACTGAGGCTGAAATTCTCAGTGGGAATATTATGAGAATGGCCAAGTCTTTCACTAAGAGAAGAGATGCAGAAGCAATTAATGTGTCTATCAAGTCCTTGAGAAAGGAAGCTAGAGCCTGGTTCAACGAGAAGGGAAGTGGGTTGGATTCTGGAGCTGAGGAAGTGTATGCAAAAGCTTCAGCATGGTACCATGTCACGTATCATCCAAGTTATTGGGGTTCCTACAATGAGGGTATGGATCGAGATCATTTTCTCAGCTTTCCATGGTGTGTCTATGACAAGCTGGTCCGCATTAAGAAGAATAAAGCAAGTATTACGAGGGCTCTGTACATGTCTTCTTTGGAGCACCAGTTCGGTCATGAATTGCATTTGTGA |
| Protein: MGKTIHLSGFPSSVTAQEVQEFLERHTGEGTVYAIKIRPNRSGGQRANATVQFTSNRHAESIISLANVRLWYGRSYLKAWERERDIVPKPRTFLHSLENIILHFGCQISNEKFSILWRAVNVCVNFGTGLRKFQFVLSLNSVEYKLEFSYENIWQIELHRPRGQTAKYLLIQLFGAPRIYEKDSQPSDNLYENPLFNFFKDIPDDQWVRGVDFTPSCCIGQSSSLCLELPHGHQLPDFRENFAYYKESEGRYILESGSTFSCNLDLVPIVGPSPGVDLPYEILFKINSLVQNGCLAGPTLDVRFYRLVNPRTINIDCIEHALDKLSHIQECCYDPLMWLNEQYRKYLKARHPPKSPAISDSGLCYVRRVQITPSKVYFCGPEINVSNRVLRYFRDDIDNFLRVSFVDEDLDKMFSTDLSSRVSSANEDRKTGIYKRILSVLRNGIVFAGKKFETLAFSSSQLRDNSIWMFASRHGLTAADIRAWMGNFCHIRNVAKYAARLGQSFGSSTETLTVHAREIEIIPDVELKWGGVNYVFSDGIGKISAEFAKKVALKCGFKGSHPSAFQIRYGGYKGVVAVDPTSPMKLSLRKSMSKYKADNHKKLDVLAFSKFQPCFLNRQLITLLSTLGVKDNVFENKQRQAIEQLDAILRDPLKAQEALDLMSPGENTNILKEMLMCGYKPDAEPFLAMMLQTFRASKLLELRTKTRIFIPDGRAMMGCLDETGTLEYGQVFVQFSSTRHKQSFNDSIMFGDHGSDQHFLVTGKVVVAKNPCLHPGDVRVLRAVNVPALHHLVDCVVFPQKGLRPHPNECSGSDLDGDIYFVCWDPELIPPRQNEPMDYSPAKSMQLDHDVTIEEVEEYFVNYIVNDSLGIIANAHTAFADREPQKAMSGPCIELAKLFSIAVDFPKTGIPAEIPRELRVKDYPDFMDKPDKPTYESHNVIGKLYREVKDIAPNNASFRSFTVEMARRSYDPDMEIDGFEDFVDDAFFYKDNYDYKLGNLMDYYGIKTEAEILSGNIMRMAKSFTKRRDAEAINVSIKSLRKEARAWFNEKGSGLDSGAEEVYAKASAWYHVTYHPSYWGSYNEGMDRDHFLSFPWCVYDKLVRIKKNKASITRALYMSSLEHQFGHELHL |